Medium severity4.4NVD Advisory· Published Oct 26, 2026
CVE-2026-116742
CVE-2026-116742
Description
HTSlib through 1.24 contains a heap out-of-bounds write and read vulnerability in bgzf_index_load_hfile() in bgzf.c that allows attackers to corrupt heap memory by supplying a crafted .gzi index entry count. A count of 0xFFFFFFFF truncates noffs to zero, causing writes past a malloc(0) buffer and an offs[-1] read in bgzf_useek(), resulting in heap corruption or crashes in tools like samtools and bcftools.
Affected products
1Patches
Vulnerability mechanics
References
6- github.com/samtools/htslib/blob/1.24/bgzf.cnvd
- github.com/samtools/htslib/commit/18dddf02bb2c0053b32acec427723555a24b2873nvd
- github.com/samtools/htslib/issues/2113nvd
- github.com/samtools/htslib/pull/2057nvd
- hackmd.io/@haindpwn/htslib-bgzf-gzi-int-truncation-oobnvd
- www.vulncheck.com/advisories/htslib-through-1.24-heap-out-of-bounds-write-via-truncated-gzi-index-countnvd
News mentions
0No linked articles in our index yet.